Rgg

Submodules

• Rgg.BayesPySpike
• Rgg.Callbacks
• Rgg.GmmSpike
• Rgg.KernelDensityDemo
• Rgg.KernelDensityFix
• Rgg.LogUtils
  • find_best_score()
  • get_result_from_log()
• Rgg.MostSimultaneous
  • SimultaneousSolver
    • SimultaneousSolver.get_figure_path()
    • SimultaneousSolver.get_used_seeds()
    • SimultaneousSolver.guess_init_curve_params()
    • SimultaneousSolver.guess_init_mapping()
    • SimultaneousSolver.guess_init_rgs()
    • SimultaneousSolver.make_bounds()
    • SimultaneousSolver.make_random_proportions()
    • SimultaneousSolver.objective_func()
    • SimultaneousSolver.objective_func_for_dlib()
    • SimultaneousSolver.prepare_for_optimization()
    • SimultaneousSolver.pretend()
    • SimultaneousSolver.select_hopeful_init_params()
    • SimultaneousSolver.solve()
    • SimultaneousSolver.split_params()
  • spike_demo()
• Rgg.RgRefiner
  • RgRefiner
    • RgRefiner.fit()
    • RgRefiner.get_components()
  • plot_rgrefiner_result()
  • spike_demo()
• Rgg.RggEghDistribution
• Rgg.RggMixtureModel
• Rgg.RggUtils
  • convert_to_probabilitic_data()
  • normal_pdf()
  • plot_histogram_2d()
• Rgg.Spike
• Rgg.SpikeData
• Rgg.UvAdjuster
  • UvAdjuster
    • UvAdjuster.fit()
    • UvAdjuster.get_fit_score()
    • UvAdjuster.guess_initial_mapping_info()
    • UvAdjuster.obj_func()
    • UvAdjuster.plot_mapped_uv()
    • UvAdjuster.plot_result()
  • compute_all()
  • get_figure_path()
  • spike_demo()
• Rgg.VariationalMixture
  • VariationalMixture
    • VariationalMixture.fit()
    • VariationalMixture.kl_divergence()
    • VariationalMixture.map_estimate()
    • VariationalMixture.plot_with_ellipses()
    • VariationalMixture.update_params()
  • cluster_number_selection_by_kl()